3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09867

Details:

PFam ID : PF09867

PFam Domain Description : Uncharacterized protein conserved in bacteria (DUF2094)

Number of Sequence in 50% Dataset : 57

Number of Sequence in Full Dataset : 149

Average sequence length: 132.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09867	A9FKT5_SORC5_16_157	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09867	A9FKT5_SORC5_16_157	100

Sequence based PCA Plot of the family - PF09867 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=19 Length=11
Motif2 Start=1 Length=17
Motif3 Start=77 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay