3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09866

Details:

PFam ID : PF09866

PFam Domain Description : Uncharacterized protein conserved in bacteria (DUF2093)

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 72

Average sequence length: 41.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09866	B9XT20_9BACT_56_284	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09866	Q9A648_CAUCR_1_42	100

Sequence based PCA Plot of the family - PF09866 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=4 Length=18
Motif2 Start=24 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay