3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09837

Details:

PFam ID : PF09837

PFam Domain Description : Uncharacterized protein conserved in bacteria (DUF2064)

Number of Sequence in 50% Dataset : 123

Number of Sequence in Full Dataset : 324

Average sequence length: 121.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09837	B6C110_9GAMM_4_64	97.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09837	D6Z675_DESAT_47_197	100

Sequence based PCA Plot of the family - PF09837 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=47 Length=8
Motif2 Start=15 Length=8
Motif3 Start=38 Length=8
Motif4 Start=6 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay