3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09832

Details:

PFam ID : PF09832

PFam Domain Description : Uncharacterized protein conserved in bacteria (DUF2059)

Number of Sequence in 50% Dataset : 121

Number of Sequence in Full Dataset : 302

Average sequence length: 63.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09832	C7RLH8_ACCPU_700_763	92.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09832	A3V5W1_9RHOB_122_186	99.6

Sequence based PCA Plot of the family - PF09832 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=15 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay