3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09811

Details:

PFam ID : PF09811

PFam Domain Description : Essential protein Yae1, N terminal

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 240

Average sequence length: 38.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09811	E9HAP8_DAPPU_29_67	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09811	Q17BI5_AEDAE_31_69	100

Sequence based PCA Plot of the family - PF09811 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=15 Length=17
Motif2 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay