3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09810

Details:

PFam ID : PF09810

PFam Domain Description : Defects in morphology protein 1, mitochondrial precursor

Number of Sequence in 50% Dataset : 55

Number of Sequence in Full Dataset : 116

Average sequence length: 323.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09810	A5DAJ5_PICGU_72_498	98.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09810	A5DAJ5_PICGU_72_498	100

Sequence based PCA Plot of the family - PF09810 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=195 Length=8
Motif2 Start=18 Length=8
Motif3 Start=399 Length=8
Motif4 Start=413 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay