3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09803

Details:

PFam ID : PF09803

PFam Domain Description : Uncharacterized conserved protein (DUF2346)

Number of Sequence in 50% Dataset : 14

Number of Sequence in Full Dataset : 50

Average sequence length: 76.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09803	F0W964_9STRA_3_72	15.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09803	Q4PCU2_USTMA_1_88	100

Sequence based PCA Plot of the family - PF09803 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=7 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay