3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09791

Details:

PFam ID : PF09791

PFam Domain Description : Oxidoreductase-like protein, N-terminal

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 184

Average sequence length: 45.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09791	D2V8W0_NAEGR_59_97	75

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09791	E9CGM9_9EUKA_88_136	95.0

Sequence based PCA Plot of the family - PF09791 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=3 Length=23

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay