3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09776 Details: PFam ID : PF09776 PFam Domain Description : Mitochondrial ribosomal protein L55 Number of Sequence in 50% Dataset : 12 Number of Sequence in Full Dataset : 40 Average sequence length: 104.7 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF09776A7RNQ0_NEMVE_24_14381.8 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF09776A7RNQ0_NEMVE_24_143100 Sequence based PCA Plot of the family - PF09776 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=28 Length=8Motif2 Start=19 Length=8Motif3 Start=10 Length=8Motif4 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF09776
PFam Domain Description : Mitochondrial ribosomal protein L55
Number of Sequence in 50% Dataset : 12
Number of Sequence in Full Dataset : 40
Average sequence length: 104.7
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER