3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09764

Details:

PFam ID : PF09764

PFam Domain Description : N-terminal glutamine amidase

Number of Sequence in 50% Dataset : 36

Number of Sequence in Full Dataset : 73

Average sequence length: 159.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09764	E9PRB7_HUMAN_22_84	85.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09764	E9PRB7_HUMAN_22_84	100

Sequence based PCA Plot of the family - PF09764 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=169 Length=8
Motif2 Start=69 Length=8
Motif3 Start=155 Length=8
Motif4 Start=2 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay