3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09762

Details:

PFam ID : PF09762

PFam Domain Description : Coiled-coil domain-containing protein (DUF2037)

Number of Sequence in 50% Dataset : 21

Number of Sequence in Full Dataset : 54

Average sequence length: 170.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09762	E9C046_9EUKA_37_92	90

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09762	E9C046_9EUKA_91_187	100

Sequence based PCA Plot of the family - PF09762 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=156 Length=8
Motif2 Start=24 Length=11
Motif3 Start=83 Length=8
Motif4 Start=180 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay