3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09747

Details:

PFam ID : PF09747

PFam Domain Description : Coiled-coil domain containing protein (DUF2052)

Number of Sequence in 50% Dataset : 63

Number of Sequence in Full Dataset : 128

Average sequence length: 151.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09747	C1MJE2_MICPC_123_389	83.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09747	C1MJE2_MICPC_123_389	100

Sequence based PCA Plot of the family - PF09747 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=10 Length=8
Motif2 Start=1 Length=8
Motif3 Start=237 Length=8
Motif4 Start=258 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay