3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09737

Details:

PFam ID : PF09737

PFam Domain Description : De-etiolated protein 1 Det1

Number of Sequence in 50% Dataset : 29

Number of Sequence in Full Dataset : 66

Average sequence length: 292.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09737	D3YXC0_MOUSE_6_138	53.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09737	E4XPR5_OIKDI_161_538	100

Sequence based PCA Plot of the family - PF09737 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay