3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09706

Details:

PFam ID : PF09706

PFam Domain Description : CRISPR-associated protein (Cas_CXXC_CXXC)

Number of Sequence in 50% Dataset : 13

Number of Sequence in Full Dataset : 46

Average sequence length: 63.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09706	B3EG01_CHLL2_94_157	75

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09706	B9K7F1_THENN_129_198	93.3

Sequence based PCA Plot of the family - PF09706 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay