3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09704

Details:

PFam ID : PF09704

PFam Domain Description : CRISPR-associated protein (Cas_Cas5)

Number of Sequence in 50% Dataset : 160

Number of Sequence in Full Dataset : 606

Average sequence length: 207.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09704	B1YE49_THENV_6_360	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09704	D1N0K0_9BACT_3_225	98.6

Sequence based PCA Plot of the family - PF09704 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay