3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09691

Details:

PFam ID : PF09691

PFam Domain Description : Bacterial chaperone lipoprotein (PulS_OutS)

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 53

Average sequence length: 100.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09691	E0SG36_DICD3_15_123	90.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09691	E5YHX0_9ENTR_17_131	100

Sequence based PCA Plot of the family - PF09691 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=35 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay