3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09681

Details:

PFam ID : PF09681

PFam Domain Description : N-terminal phage replisome organiser (Phage_rep_org_N)

Number of Sequence in 50% Dataset : 14

Number of Sequence in Full Dataset : 114

Average sequence length: 114.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09681	D4J588_9FIRM_1_63	15.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09681	D1VSS5_9FIRM_9_127	100

Sequence based PCA Plot of the family - PF09681 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay