3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09644

Details:

PFam ID : PF09644

PFam Domain Description : Mg296 protein

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 4

Average sequence length: 90.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09644	D0AIV7_ENTFC_1_74	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09644	D3FIX8_MYCGF_4_124	100

Sequence based PCA Plot of the family - PF09644 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay