3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09637 Details: PFam ID : PF09637 PFam Domain Description : Med18 protein Number of Sequence in 50% Dataset : 39 Number of Sequence in Full Dataset : 122 Average sequence length: 175.3 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF09637C5XXF2_SORBI_62_19034.2 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF09637Q0USA0_PHANO_2_255100 Sequence based PCA Plot of the family - PF09637 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=19 Length=8Motif2 Start=10 Length=8Motif3 Start=1 Length=8Motif4 Start=116 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF09637
PFam Domain Description : Med18 protein
Number of Sequence in 50% Dataset : 39
Number of Sequence in Full Dataset : 122
Average sequence length: 175.3
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER