3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09589

Details:

PFam ID : PF09589

PFam Domain Description : HrpA pilus formation protein

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 12

Average sequence length: 110.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09589	E4MIC3_9FIRM_147_272	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09589	Q6L8Z0_PSESX_1_113	100

Sequence based PCA Plot of the family - PF09589 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay