3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09537

Details:

PFam ID : PF09537

PFam Domain Description : Domain of unknown function (DUF2383)

Number of Sequence in 50% Dataset : 81

Number of Sequence in Full Dataset : 217

Average sequence length: 108.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09537	A7H9R5_ANADF_5_113	40

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09537	A3TIM1_9MICO_3_116	100

Sequence based PCA Plot of the family - PF09537 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=28
Motif2 Start=69 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay