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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09522
Details:

PFam ID : PF09522

PFam Domain Description : R.Pab1 restriction endonuclease

Number of Sequence in 50% Dataset : 8

Number of Sequence in Full Dataset : 8

Average sequence length: 101.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF09522D0W6U2_NEILA_1_179No suitable BRS could be identified
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF09522Q4HQE5_CAMUP_8_139100
Sequence based PCA Plot of the family - PF09522 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay