3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09516

Details:

PFam ID : PF09516

PFam Domain Description : CfrBI restriction endonuclease

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 10

Average sequence length: 235.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09516	B5YIR7_THEYD_2_252	66.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09516	Q1PX74_9BACT_1_301	100

Sequence based PCA Plot of the family - PF09516 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=220 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay