3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09453

Details:

PFam ID : PF09453

PFam Domain Description : HIRA B motif

Number of Sequence in 50% Dataset : 11

Number of Sequence in Full Dataset : 57

Average sequence length: 22.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09453	Q6FND2_CANGA_12_106	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09453	HIR1_USTMA_437_460	100

Sequence based PCA Plot of the family - PF09453 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay