3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09384

Details:

PFam ID : PF09384

PFam Domain Description : UTP15 C terminal

Number of Sequence in 50% Dataset : 56

Number of Sequence in Full Dataset : 152

Average sequence length: 144.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09384	B7XJW6_ENTBH_289_433	74.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09384	E0VM06_PEDHC_323_484	100

Sequence based PCA Plot of the family - PF09384 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=10 Length=8
Motif2 Start=1 Length=8
Motif3 Start=56 Length=8
Motif4 Start=29 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay