3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09360

Details:

PFam ID : PF09360

PFam Domain Description : Iron-binding zinc finger CDGSH type

Number of Sequence in 50% Dataset : 10

Number of Sequence in Full Dataset : 679

Average sequence length: 42.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09360	A2E718_TRIVA_851_953	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09360	D4IK12_9BACT_168_233	99.7

Sequence based PCA Plot of the family - PF09360 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=10 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay