3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09324

Details:

PFam ID : PF09324

PFam Domain Description : Domain of unknown function (DUF1981)

Number of Sequence in 50% Dataset : 48

Number of Sequence in Full Dataset : 189

Average sequence length: 81.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09324	A2FDN4_TRIVA_831_915	72.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09324	Q5CZH1_PARTE_1049_1139	100

Sequence based PCA Plot of the family - PF09324 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=30 Length=18
Motif2 Start=12 Length=17

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay