3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09321

Details:

PFam ID : PF09321

PFam Domain Description : Domain of unknown function (DUF1978)

Number of Sequence in 50% Dataset : 10

Number of Sequence in Full Dataset : 16

Average sequence length: 204.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09321	D0ZYT4_CHLPP_295_537	22.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09321	D0ZYT7_CHLPP_275_519	100

Sequence based PCA Plot of the family - PF09321 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=19 Length=18
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay