3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09292

Details:

PFam ID : PF09292

PFam Domain Description : Endonuclease VIII-like 1, DNA bind

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 11

Average sequence length: 33.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09292	B3RRS2_TRIAD_278_307	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09292	B3RRS2_TRIAD_278_307	100

Sequence based PCA Plot of the family - PF09292 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=30

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay