3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09285 Details: PFam ID : PF09285 PFam Domain Description : Elongation factor P, C-terminal Number of Sequence in 50% Dataset : 6 Number of Sequence in Full Dataset : 879 Average sequence length: 55.8 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF09285A8NRT4_COPC7_76_160No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF09285D4G8B0_RIEPU_129_18599.6 Sequence based PCA Plot of the family - PF09285 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=9 Length=8Motif2 Start=23 Length=8Motif3 Start=35 Length=23 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF09285
PFam Domain Description : Elongation factor P, C-terminal
Number of Sequence in 50% Dataset : 6
Number of Sequence in Full Dataset : 879
Average sequence length: 55.8
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER