3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09277

Details:

PFam ID : PF09277

PFam Domain Description : Erythronolide synthase, docking

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 6

Average sequence length: 44.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09277	Q014Y8_OSTTA_731_828	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09277	D5ZU00_9ACTO_129_185	100

Sequence based PCA Plot of the family - PF09277 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay