3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09221

Details:

PFam ID : PF09221

PFam Domain Description : Bacteriocin class IId cyclical uberolysin-like

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 19

Average sequence length: 61.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09221	A3LZ28_PICST_83_382	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09221	Q47765_ENTFA_37_105	94.4

Sequence based PCA Plot of the family - PF09221 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay