3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09212 Details: PFam ID : PF09212 PFam Domain Description : Carbohydrate binding module 27 Number of Sequence in 50% Dataset : 18 Number of Sequence in Full Dataset : 29 Average sequence length: 166.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF09212B1QT92_CLOBU_273_43994.1 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF09212E4K641_9FIRM_467_659100 Sequence based PCA Plot of the family - PF09212 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=19 Length=8Motif2 Start=10 Length=8Motif3 Start=1 Length=8Motif4 Start=155 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF09212
PFam Domain Description : Carbohydrate binding module 27
Number of Sequence in 50% Dataset : 18
Number of Sequence in Full Dataset : 29
Average sequence length: 166.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER