3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09189

Details:

PFam ID : PF09189

PFam Domain Description : Domain of unknown function (DUF1952)

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 5

Average sequence length: 62

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09189	B7A9C5_THEAQ_91_167	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09189	B7A9C5_THEAQ_91_167	100

Sequence based PCA Plot of the family - PF09189 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=4 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay