3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09188

Details:

PFam ID : PF09188

PFam Domain Description : Domain of unknown function (DUF1951)

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 4

Average sequence length: 102.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09188	A7AUG9_BABBO_55_222	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09188	D3FG01_MYCGH_13_149	100

Sequence based PCA Plot of the family - PF09188 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay