3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09185

Details:

PFam ID : PF09185

PFam Domain Description : Domain of unknown function (DUF1948)

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 3

Average sequence length: 93.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09185	A7AUG9_BABBO_55_222	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09185	Y030_MYCPN_29_168	100

Sequence based PCA Plot of the family - PF09185 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay