3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09182

Details:

PFam ID : PF09182

PFam Domain Description : Bacterial purine repressor, N-terminal

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 125

Average sequence length: 68.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09182	B7X5Q0_COMTE_262_324	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09182	B7DTN0_9BACL_2_71	100

Sequence based PCA Plot of the family - PF09182 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=18 Length=17
Motif2 Start=1 Length=8
Motif3 Start=46 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay