3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09172

Details:

PFam ID : PF09172

PFam Domain Description : Domain of unknown function (DUF1943)

Number of Sequence in 50% Dataset : 137

Number of Sequence in Full Dataset : 288

Average sequence length: 270.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09172	A8WAA7_DERVA_769_1067	84.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09172	A0NE24_ANOGA_606_930	100

Sequence based PCA Plot of the family - PF09172 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=178 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay