3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09168

Details:

PFam ID : PF09168

PFam Domain Description : X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal

Number of Sequence in 50% Dataset : 23

Number of Sequence in Full Dataset : 69

Average sequence length: 139.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09168	Q5DRA0_LACHE_1_59	81.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09168	C0XH66_LACHI_6_164	100

Sequence based PCA Plot of the family - PF09168 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=5 Length=27
Motif2 Start=51 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay