3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09165

Details:

PFam ID : PF09165

PFam Domain Description : Ubiquinol-cytochrome c reductase 8 kDa, N-terminal

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 22

Average sequence length: 48.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09165	F1NVF3_CHICK_407_474	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09165	B7QKP2_IXOSC_1_51	90.4

Sequence based PCA Plot of the family - PF09165 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay