3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09122

Details:

PFam ID : PF09122

PFam Domain Description : Domain of unknown function (DUF1930)

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 6

Average sequence length: 56.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09122	A9SSL1_PHYPA_290_434	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09122	Q582K7_9TRYP_305_373	100

Sequence based PCA Plot of the family - PF09122 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay