3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09060

Details:

PFam ID : PF09060

PFam Domain Description : L27_N

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 10

Average sequence length: 44

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09060	Q4RRK1_TETNG_44_145	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09060	F1Q906_DANRE_1_49	100

Sequence based PCA Plot of the family - PF09060 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay