3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09053

Details:

PFam ID : PF09053

PFam Domain Description : CagZ

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 3

Average sequence length: 91.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09053	E7JDT9_ECOLX_1_243	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09053	Q75X62_HELPY_1_199	100

Sequence based PCA Plot of the family - PF09053 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay