3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09047

Details:

PFam ID : PF09047

PFam Domain Description : MEF2 binding

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 4

Average sequence length: 25.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09047	C5JMT3_AJEDS_8_137	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09047	C3Z7V4_BRAFL_2709_2740	100

Sequence based PCA Plot of the family - PF09047 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay