3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09045

Details:

PFam ID : PF09045

PFam Domain Description : L27_2

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 12

Average sequence length: 52.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09045	C5JMT3_AJEDS_8_137	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09045	A7SRG3_NEMVE_6_63	100

Sequence based PCA Plot of the family - PF09045 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay