3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09030

Details:

PFam ID : PF09030

PFam Domain Description : Creb binding

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 25

Average sequence length: 100.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09030	Q6DKE7_XENLA_1_123	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09030	E9GW09_DAPPU_259_361	100

Sequence based PCA Plot of the family - PF09030 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay