3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08991

Details:

PFam ID : PF08991

PFam Domain Description : Domain of unknown function (DUF1903)

Number of Sequence in 50% Dataset : 14

Number of Sequence in Full Dataset : 85

Average sequence length: 58.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08991	Q0CLH5_ASPTN_107_152	38.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08991	D7TGV7_VITVI_6_63	98.8

Sequence based PCA Plot of the family - PF08991 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=41

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay