3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08977

Details:

PFam ID : PF08977

PFam Domain Description : Bypass of Forespore C, N terminal

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 21

Average sequence length: 47.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08977	B2GUN8_XENTR_1245_1366	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08977	Q5WHR7_BACSK_48_98	100

Sequence based PCA Plot of the family - PF08977 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay