3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08959

Details:

PFam ID : PF08959

PFam Domain Description : Domain of unknown function (DUF1872)

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 14

Average sequence length: 214.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08959	E7EM45_HUMAN_289_504	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08959	C3Z9Q5_BRAFL_1_150	100

Sequence based PCA Plot of the family - PF08959 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay