3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08931

Details:

PFam ID : PF08931

PFam Domain Description : Domain of unknown function (DUF1913)

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 15

Average sequence length: 135.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08931	C2ITR1_VIBCH_1_49	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08931	Q71AV7_9CAUD_1_146	100

Sequence based PCA Plot of the family - PF08931 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay